Language Breakdown
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I-Shaped Developer
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Collaboration Network
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Repos
21
PRs
0
Growth
+18%
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Coding Streak
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Viral Identification in Blood by Expression Severity
Repository to host tool-specific module files for the Nextflow DSL2 community!
Test data to be used for automated testing with the nf-core pipelines
Assembly and intrahost/low-frequency variant calling for viral samples
Nextflow Pipeline for processing Streptococcus pneumoniae sequencing raw reads (FASTQ files) by the GPS Project (Global Pneumococcal Sequencing Project)
This Nextflow DSL2 pipeline calls variants on long read alignment. It is run after sanger-tol/readmapping in the Sanger ToL production suite but with options to run on unaligned reads.
This Nextflow DSL2 pipeline takes aligned HiC reads, creates contact maps and a table of statistics.
Nextflow DSL2 pipeline to align short and long reads to genome assembly. This workflow is part of the Tree of Life production suite.
Open Source Impact
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